Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.19■□□□□ 0.02
GCM1Q9NP62 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 LINC00265-3P-201ENST00000447588 903 ntBASIC15.18■□□□□ 0.02
GCM1Q9NP62 TOB2P1-201ENST00000469761 992 ntBASIC15.18■□□□□ 0.02
GCM1Q9NP62 VENTXP7-201ENST00000475503 772 ntBASIC15.18■□□□□ 0.02
GCM1Q9NP62 AC112698.1-201ENST00000510299 916 ntBASIC15.18■□□□□ 0.02
GCM1Q9NP62 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 AL353801.3-201ENST00000609898 542 ntBASIC15.18■□□□□ 0.02
GCM1Q9NP62 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.18■□□□□ 0.02
GCM1Q9NP62 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.18■□□□□ 0.02
GCM1Q9NP62 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GCM1Q9NP62 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.18■□□□□ 0.02
GCM1Q9NP62 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 AP000997.3-201ENST00000623333 2250 ntBASIC15.17■□□□□ 0.02
GCM1Q9NP62 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 AC233702.3-201ENST00000578656 1387 ntBASIC15.17■□□□□ 0.02
GCM1Q9NP62 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 AL845331.1-201ENST00000424978 1190 ntBASIC15.17■□□□□ 0.02
GCM1Q9NP62 AC246785.2-201ENST00000432512 513 ntBASIC15.17■□□□□ 0.02
GCM1Q9NP62 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GCM1Q9NP62 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GCM1Q9NP62 FLJ13224-201ENST00000313737 1514 ntBASIC15.17■□□□□ 0.02
GCM1Q9NP62 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms