Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 FAM86C2P-203ENST00000528684 1004 ntBASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 SPDYE9P-201ENST00000570642 692 ntBASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 STK25P1-201ENST00000585406 838 ntBASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 LINC02560-201ENST00000596379 459 ntBASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 SPDYE10P-202ENST00000612005 668 ntBASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 SPDYE8P-202ENST00000612377 668 ntBASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 AC008761.3-201ENST00000624803 892 ntBASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
C11orf49Q9H6J7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 AL355306.1-201ENST00000415580 579 ntBASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 AL671277.1-201ENST00000429656 993 ntBASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 KLF2P3-201ENST00000451977 1087 ntBASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 KRT8P48-201ENST00000515599 1220 ntBASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
C11orf49Q9H6J7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.33■□□□□ 0.69
C11orf49Q9H6J7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 AL592309.1-201ENST00000443127 649 ntBASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 AL512356.2-201ENST00000546955 174 ntBASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
C11orf49Q9H6J7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 ESPNP-201ENST00000270691 2015 ntBASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 KRT18P32-201ENST00000424695 1287 ntBASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 HLA-V-201ENST00000429037 534 ntBASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf49Q9H6J7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms