Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF41Q9H4P4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 AC012317.2-201ENST00000623305 2251 ntBASIC20.92■□□□□ 0.94
RNF41Q9H4P4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF41Q9H4P4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 NOC2LP2-201ENST00000407594 1944 ntBASIC20.91■□□□□ 0.94
RNF41Q9H4P4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 IFNL4P1-201ENST00000607083 540 ntBASIC20.91■□□□□ 0.94
RNF41Q9H4P4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF41Q9H4P4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 AC005104.2-201ENST00000427818 678 ntBASIC20.9■□□□□ 0.94
RNF41Q9H4P4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 AL691432.3-201ENST00000621860 400 ntBASIC20.9■□□□□ 0.94
RNF41Q9H4P4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF41Q9H4P4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF41Q9H4P4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF41Q9H4P4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF41Q9H4P4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF41Q9H4P4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.89■□□□□ 0.94
RNF41Q9H4P4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RNF41Q9H4P4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF41Q9H4P4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF41Q9H4P4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF41Q9H4P4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms