Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 KRT18P65-201ENST00000439811 1286 ntBASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 DDX43P3-201ENST00000441064 443 ntBASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 LINC01451-201ENST00000623792 534 ntBASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 AL157888.1-201ENST00000631930 593 ntBASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 AC022211.2-201ENST00000585075 2527 ntBASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR2J3Q9H1A7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 AC100803.2-201ENST00000562459 1963 ntBASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR2J3Q9H1A7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 LINC01568-207ENST00000641790 1380 ntBASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.42■□□□□ 0.22
POLR2J3Q9H1A7 AC024563.2-201ENST00000603282 481 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms