Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NBPF3Q9H094 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
NBPF3Q9H094 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NBPF3Q9H094 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NBPF3Q9H094 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 AC134043.2-201ENST00000624206 2238 ntBASIC21.03■□□□□ 0.96
NBPF3Q9H094 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 MIR1233-2-201ENST00000408138 82 ntBASIC21.03■□□□□ 0.96
NBPF3Q9H094 MIR1233-1-201ENST00000408722 82 ntBASIC21.03■□□□□ 0.96
NBPF3Q9H094 DDX43P3-201ENST00000441064 443 ntBASIC21.03■□□□□ 0.96
NBPF3Q9H094 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 AC009533.2-201ENST00000543664 586 ntBASIC21.03■□□□□ 0.96
NBPF3Q9H094 AC092865.5-201ENST00000545435 363 ntBASIC21.03■□□□□ 0.96
NBPF3Q9H094 AP001005.1-201ENST00000571755 1248 ntBASIC21.03■□□□□ 0.96
NBPF3Q9H094 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.03■□□□□ 0.96
NBPF3Q9H094 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NBPF3Q9H094 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.03■□□□□ 0.96
NBPF3Q9H094 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.02■□□□□ 0.96
NBPF3Q9H094 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NBPF3Q9H094 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NBPF3Q9H094 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NBPF3Q9H094 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NBPF3Q9H094 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NBPF3Q9H094 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.02■□□□□ 0.96
NBPF3Q9H094 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.02■□□□□ 0.96
NBPF3Q9H094 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NBPF3Q9H094 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NBPF3Q9H094 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.02■□□□□ 0.96
NBPF3Q9H094 COX5BP2-201ENST00000392354 334 ntBASIC21.02■□□□□ 0.96
NBPF3Q9H094 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.02■□□□□ 0.96
NBPF3Q9H094 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.02■□□□□ 0.96
NBPF3Q9H094 AC026471.1-201ENST00000564629 3026 ntBASIC21.02■□□□□ 0.96
NBPF3Q9H094 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.02■□□□□ 0.96
NBPF3Q9H094 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NBPF3Q9H094 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.02■□□□□ 0.96
NBPF3Q9H094 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NBPF3Q9H094 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.02■□□□□ 0.95
NBPF3Q9H094 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
NBPF3Q9H094 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NBPF3Q9H094 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NBPF3Q9H094 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.02■□□□□ 0.95
NBPF3Q9H094 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 SAPCD2P3-201ENST00000455031 850 ntBASIC21.01■□□□□ 0.95
NBPF3Q9H094 KRT18P58-201ENST00000527480 1120 ntBASIC21.01■□□□□ 0.95
NBPF3Q9H094 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 MIR5100-201ENST00000579544 119 ntBASIC21.01■□□□□ 0.95
NBPF3Q9H094 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 AC019129.2-201ENST00000609837 1235 ntBASIC21.01■□□□□ 0.95
NBPF3Q9H094 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NBPF3Q9H094 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.01■□□□□ 0.95
NBPF3Q9H094 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21■□□□□ 0.95
NBPF3Q9H094 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NBPF3Q9H094 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
NBPF3Q9H094 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NBPF3Q9H094 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NBPF3Q9H094 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms