Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 AC010240.3-201ENST00000607688 395 ntBASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 AC100803.2-201ENST00000562459 1963 ntBASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FOXP3Q9BZS1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 CROCCP2-202ENST00000412962 2773 ntBASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
FOXP3Q9BZS1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 AC005332.1-201ENST00000577698 1310 ntBASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
FOXP3Q9BZS1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXP3Q9BZS1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 AC012313.1-201ENST00000593393 3059 ntBASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms