Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.77■□□□□ 0.44
COL25A1Q9BXS0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.77■□□□□ 0.44
COL25A1Q9BXS0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.77■□□□□ 0.44
COL25A1Q9BXS0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.77■□□□□ 0.44
COL25A1Q9BXS0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL25A1Q9BXS0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL25A1Q9BXS0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
COL25A1Q9BXS0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
COL25A1Q9BXS0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.43
COL25A1Q9BXS0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
COL25A1Q9BXS0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
COL25A1Q9BXS0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL25A1Q9BXS0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 SIRPAP1-201ENST00000448467 1770 ntBASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 TUBB1P2-201ENST00000422712 1306 ntBASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 TUBB1P1-201ENST00000503144 1300 ntBASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 AC093677.2-201ENST00000600169 1863 ntBASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 SLC25A24P2-201ENST00000415059 510 ntBASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
COL25A1Q9BXS0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 AC097637.2-201ENST00000624096 1997 ntBASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 FBXW4P1-201ENST00000426721 2239 ntBASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 MIR1247-201ENST00000408206 136 ntBASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 GPAA1P2-201ENST00000417923 928 ntBASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 AL021578.1-201ENST00000613646 709 ntBASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.75■□□□□ 0.43
COL25A1Q9BXS0 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 BOLA2P3-201ENST00000404566 256 ntBASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 AL161645.1-201ENST00000622716 1255 ntBASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 AC004840.1-201ENST00000636359 365 ntBASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COL25A1Q9BXS0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms