Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC008894.3-201ENST00000624324 3103 ntBASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 AC073912.3-201ENST00000624414 853 ntBASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 AL024508.2-201ENST00000607749 1894 ntBASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHRDL1Q9BU40 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 AP000523.1-201ENST00000398242 1049 ntBASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 AC010203.1-204ENST00000548782 407 ntBASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 MIR3917-201ENST00000580971 93 ntBASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 AL138966.2-201ENST00000621997 464 ntBASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 AC092865.7-201ENST00000641832 219 ntBASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHRDL1Q9BU40 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 FLJ13224-201ENST00000313737 1514 ntBASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms