Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NPAS2Q99743 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.41■□□□□ 0.38
NPAS2Q99743 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.41■□□□□ 0.38
NPAS2Q99743 AL359075.1-203ENST00000462729 1002 ntBASIC17.41■□□□□ 0.38
NPAS2Q99743 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.41■□□□□ 0.38
NPAS2Q99743 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS2Q99743 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NPAS2Q99743 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 AC009102.3-201ENST00000623118 1491 ntBASIC17.41■□□□□ 0.38
NPAS2Q99743 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS2Q99743 AL163051.1-201ENST00000569214 1512 ntBASIC17.41■□□□□ 0.38
NPAS2Q99743 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS2Q99743 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NPAS2Q99743 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
NPAS2Q99743 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS2Q99743 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 AC092647.4-201ENST00000457211 535 ntBASIC17.4■□□□□ 0.38
NPAS2Q99743 GCSHP2-201ENST00000560971 527 ntBASIC17.4■□□□□ 0.38
NPAS2Q99743 LINC01238-205ENST00000567549 1107 ntBASIC17.4■□□□□ 0.38
NPAS2Q99743 NEK4P2-201ENST00000580004 1012 ntBASIC17.4■□□□□ 0.38
NPAS2Q99743 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.4■□□□□ 0.38
NPAS2Q99743 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NPAS2Q99743 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.4■□□□□ 0.38
NPAS2Q99743 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.4■□□□□ 0.38
NPAS2Q99743 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NPAS2Q99743 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NPAS2Q99743 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.4■□□□□ 0.38
NPAS2Q99743 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NPAS2Q99743 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.4■□□□□ 0.38
NPAS2Q99743 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS2Q99743 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.4■□□□□ 0.38
NPAS2Q99743 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NPAS2Q99743 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NPAS2Q99743 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.4■□□□□ 0.38
NPAS2Q99743 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPAS2Q99743 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NPAS2Q99743 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.39■□□□□ 0.38
NPAS2Q99743 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
NPAS2Q99743 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.39■□□□□ 0.37
NPAS2Q99743 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NPAS2Q99743 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.39■□□□□ 0.37
NPAS2Q99743 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.39■□□□□ 0.37
NPAS2Q99743 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NPAS2Q99743 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.39■□□□□ 0.37
NPAS2Q99743 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.39■□□□□ 0.37
NPAS2Q99743 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.39■□□□□ 0.37
NPAS2Q99743 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.39■□□□□ 0.37
NPAS2Q99743 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.39■□□□□ 0.37
NPAS2Q99743 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NPAS2Q99743 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.39■□□□□ 0.37
NPAS2Q99743 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.39■□□□□ 0.37
NPAS2Q99743 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.39■□□□□ 0.37
NPAS2Q99743 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NPAS2Q99743 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 AC036111.1-201ENST00000533973 1582 ntBASIC17.39■□□□□ 0.37
NPAS2Q99743 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 LINC01126-201ENST00000623515 1646 ntBASIC17.39■□□□□ 0.37
NPAS2Q99743 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPAS2Q99743 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NPAS2Q99743 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms