Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BARD1Q99728 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BARD1Q99728 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BARD1Q99728 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BARD1Q99728 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BARD1Q99728 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BARD1Q99728 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BARD1Q99728 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
BARD1Q99728 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BARD1Q99728 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BARD1Q99728 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
BARD1Q99728 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.03■□□□□ 0.32
BARD1Q99728 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
BARD1Q99728 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.02■□□□□ 0.32
BARD1Q99728 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.02■□□□□ 0.32
BARD1Q99728 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.02■□□□□ 0.32
BARD1Q99728 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 TSPY19P-201ENST00000418461 509 ntBASIC17.02■□□□□ 0.32
BARD1Q99728 CHCHD2P8-201ENST00000429873 447 ntBASIC17.02■□□□□ 0.32
BARD1Q99728 TSPY18P-201ENST00000441642 509 ntBASIC17.02■□□□□ 0.32
BARD1Q99728 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.02■□□□□ 0.32
BARD1Q99728 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
BARD1Q99728 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.02■□□□□ 0.32
BARD1Q99728 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.02■□□□□ 0.32
BARD1Q99728 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
BARD1Q99728 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.02■□□□□ 0.32
BARD1Q99728 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.02■□□□□ 0.32
BARD1Q99728 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
BARD1Q99728 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BARD1Q99728 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
BARD1Q99728 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
BARD1Q99728 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.02■□□□□ 0.31
BARD1Q99728 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
BARD1Q99728 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BARD1Q99728 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BARD1Q99728 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BARD1Q99728 SIRPAP1-201ENST00000448467 1770 ntBASIC17.02■□□□□ 0.31
BARD1Q99728 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BARD1Q99728 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
BARD1Q99728 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.02■□□□□ 0.31
BARD1Q99728 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BARD1Q99728 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BARD1Q99728 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BARD1Q99728 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BARD1Q99728 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 AC141586.5-201ENST00000624546 2050 ntBASIC17.01■□□□□ 0.31
BARD1Q99728 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.01■□□□□ 0.31
BARD1Q99728 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.01■□□□□ 0.31
BARD1Q99728 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.01■□□□□ 0.31
BARD1Q99728 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.01■□□□□ 0.31
BARD1Q99728 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.01■□□□□ 0.31
BARD1Q99728 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.01■□□□□ 0.31
BARD1Q99728 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
BARD1Q99728 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.01■□□□□ 0.31
BARD1Q99728 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
BARD1Q99728 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
BARD1Q99728 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BARD1Q99728 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.01■□□□□ 0.31
BARD1Q99728 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BARD1Q99728 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.01■□□□□ 0.31
BARD1Q99728 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
BARD1Q99728 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BARD1Q99728 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17■□□□□ 0.31
BARD1Q99728 PHGDH-209ENST00000641074 1780 ntBASIC17■□□□□ 0.31
BARD1Q99728 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17■□□□□ 0.31
BARD1Q99728 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BARD1Q99728 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BARD1Q99728 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
BARD1Q99728 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 265.8 ms