Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.89■□□□□ 0.13
SPENQ96T58 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SPENQ96T58 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.89■□□□□ 0.13
SPENQ96T58 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
SPENQ96T58 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.89■□□□□ 0.13
SPENQ96T58 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.88■□□□□ 0.13
SPENQ96T58 MIR4745-201ENST00000577608 62 ntBASIC15.88■□□□□ 0.13
SPENQ96T58 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.88■□□□□ 0.13
SPENQ96T58 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.88■□□□□ 0.13
SPENQ96T58 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.88■□□□□ 0.13
SPENQ96T58 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 AC099522.2-201ENST00000607001 744 ntBASIC15.88■□□□□ 0.13
SPENQ96T58 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.88■□□□□ 0.13
SPENQ96T58 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SPENQ96T58 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.88■□□□□ 0.13
SPENQ96T58 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.88■□□□□ 0.13
SPENQ96T58 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.88■□□□□ 0.13
SPENQ96T58 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.88■□□□□ 0.13
SPENQ96T58 AC051619.7-201ENST00000568314 623 ntBASIC15.88■□□□□ 0.13
SPENQ96T58 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.88■□□□□ 0.13
SPENQ96T58 AC092902.6-201ENST00000641783 218 ntBASIC15.88■□□□□ 0.13
SPENQ96T58 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPENQ96T58 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 AL020989.1-201ENST00000422979 469 ntBASIC15.87■□□□□ 0.13
SPENQ96T58 PAWRP1-201ENST00000451083 565 ntBASIC15.87■□□□□ 0.13
SPENQ96T58 AJ011932.1-201ENST00000621707 465 ntBASIC15.87■□□□□ 0.13
SPENQ96T58 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.87■□□□□ 0.13
SPENQ96T58 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.87■□□□□ 0.13
SPENQ96T58 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.87■□□□□ 0.13
SPENQ96T58 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 AC019129.2-201ENST00000609837 1235 ntBASIC15.87■□□□□ 0.13
SPENQ96T58 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.87■□□□□ 0.13
SPENQ96T58 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SPENQ96T58 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPENQ96T58 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.87■□□□□ 0.13
SPENQ96T58 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.87■□□□□ 0.13
SPENQ96T58 AC087641.1-201ENST00000557561 1021 ntBASIC15.87■□□□□ 0.13
SPENQ96T58 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.86■□□□□ 0.13
SPENQ96T58 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SPENQ96T58 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPENQ96T58 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.86■□□□□ 0.13
SPENQ96T58 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.86■□□□□ 0.13
SPENQ96T58 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SPENQ96T58 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.86■□□□□ 0.13
SPENQ96T58 AC004877.2-201ENST00000623941 599 ntBASIC15.86■□□□□ 0.13
SPENQ96T58 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPENQ96T58 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPENQ96T58 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SPENQ96T58 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.86■□□□□ 0.13
SPENQ96T58 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPENQ96T58 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.86■□□□□ 0.13
SPENQ96T58 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.86■□□□□ 0.13
SPENQ96T58 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SPENQ96T58 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.86■□□□□ 0.13
SPENQ96T58 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.86■□□□□ 0.13
SPENQ96T58 MEIS3P1-201ENST00000495167 958 ntBASIC15.86■□□□□ 0.13
SPENQ96T58 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.86■□□□□ 0.13
SPENQ96T58 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms