Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX3Q96PT4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 POM121L3P-201ENST00000419331 1163 ntBASIC13.81□□□□□ -0.2
DUX3Q96PT4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 AC112698.1-201ENST00000510299 916 ntBASIC13.81□□□□□ -0.2
DUX3Q96PT4 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 AP002469.2-201ENST00000531724 424 ntBASIC13.81□□□□□ -0.2
DUX3Q96PT4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 REXO1L6P-202ENST00000619970 1078 ntBASIC13.81□□□□□ -0.2
DUX3Q96PT4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
DUX3Q96PT4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.81□□□□□ -0.2
DUX3Q96PT4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 TP73-AS1-207ENST00000624167 988 ntBASIC13.8□□□□□ -0.2
DUX3Q96PT4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 AC073592.3-201ENST00000625118 1834 ntBASIC13.8□□□□□ -0.2
DUX3Q96PT4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX3Q96PT4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
DUX3Q96PT4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX3Q96PT4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
DUX3Q96PT4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms