Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 Z85996.1-201ENST00000494644 937 ntBASIC13.46□□□□□ -0.25
AP1S3Q96PC3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 UNC93B4-201ENST00000505679 747 ntBASIC13.46□□□□□ -0.25
AP1S3Q96PC3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 IKBKGP1-201ENST00000612193 1073 ntBASIC13.46□□□□□ -0.25
AP1S3Q96PC3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP1S3Q96PC3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 KRT8P11-201ENST00000409686 1436 ntBASIC13.46□□□□□ -0.26
AP1S3Q96PC3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.46□□□□□ -0.26
AP1S3Q96PC3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 FLJ13224-201ENST00000313737 1514 ntBASIC13.45□□□□□ -0.26
AP1S3Q96PC3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.45□□□□□ -0.26
AP1S3Q96PC3 REXO1L9P-201ENST00000604264 2108 ntBASIC13.45□□□□□ -0.26
AP1S3Q96PC3 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.44□□□□□ -0.26
AP1S3Q96PC3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms