Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.31■□□□□ 0.52
RPRD1AQ96P16 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 OR6D1P-202ENST00000641007 5290 ntBASIC18.3■□□□□ 0.52
RPRD1AQ96P16 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 INTS4P1-201ENST00000438455 1935 ntBASIC18.3■□□□□ 0.52
RPRD1AQ96P16 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RPRD1AQ96P16 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 DDX43P3-201ENST00000441064 443 ntBASIC18.29■□□□□ 0.52
RPRD1AQ96P16 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPRD1AQ96P16 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPRD1AQ96P16 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms