Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF558Q96NG5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 DDX43P3-201ENST00000441064 443 ntBASIC18.77■□□□□ 0.6
ZNF558Q96NG5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 SNHG9-202ENST00000564014 471 ntBASIC18.77■□□□□ 0.6
ZNF558Q96NG5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 MIR4469-201ENST00000583919 79 ntBASIC18.77■□□□□ 0.6
ZNF558Q96NG5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 C20orf181-201ENST00000623918 480 ntBASIC18.77■□□□□ 0.6
ZNF558Q96NG5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.77■□□□□ 0.6
ZNF558Q96NG5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ZNF558Q96NG5 KRT18P28-201ENST00000453838 1332 ntBASIC18.76■□□□□ 0.59
ZNF558Q96NG5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 MRPL20P1-201ENST00000400819 433 ntBASIC18.76■□□□□ 0.59
ZNF558Q96NG5 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.76■□□□□ 0.59
ZNF558Q96NG5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 AC010654.1-201ENST00000615722 808 ntBASIC18.76■□□□□ 0.59
ZNF558Q96NG5 AL513190.1-201ENST00000621254 727 ntBASIC18.76■□□□□ 0.59
ZNF558Q96NG5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF558Q96NG5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 GPR89P-201ENST00000407924 1495 ntBASIC18.75■□□□□ 0.59
ZNF558Q96NG5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF558Q96NG5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms