Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 IGHGP-201ENST00000390555 1178 ntBASIC21.1■□□□□ 0.97
DDX11Q96FC9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.1■□□□□ 0.97
DDX11Q96FC9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 SLC25A6P5-201ENST00000435663 894 ntBASIC21.1■□□□□ 0.97
DDX11Q96FC9 KRT17P6-201ENST00000453795 1220 ntBASIC21.1■□□□□ 0.97
DDX11Q96FC9 EMBP1-201ENST00000458200 901 ntBASIC21.1■□□□□ 0.97
DDX11Q96FC9 GUSBP12-201ENST00000513727 720 ntBASIC21.1■□□□□ 0.97
DDX11Q96FC9 AC074051.2-201ENST00000565115 352 ntBASIC21.1■□□□□ 0.97
DDX11Q96FC9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 KRT8P10-201ENST00000450021 1447 ntBASIC21.1■□□□□ 0.97
DDX11Q96FC9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 AC100803.2-201ENST00000562459 1963 ntBASIC21.1■□□□□ 0.97
DDX11Q96FC9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
DDX11Q96FC9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX11Q96FC9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
DDX11Q96FC9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
DDX11Q96FC9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.09■□□□□ 0.97
DDX11Q96FC9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX11Q96FC9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
DDX11Q96FC9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX11Q96FC9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
DDX11Q96FC9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DDX11Q96FC9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX11Q96FC9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX11Q96FC9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
DDX11Q96FC9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX11Q96FC9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX11Q96FC9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX11Q96FC9 KRT18P31-201ENST00000506277 1292 ntBASIC21.08■□□□□ 0.97
DDX11Q96FC9 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX11Q96FC9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
DDX11Q96FC9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX11Q96FC9 AC124864.1-201ENST00000623408 392 ntBASIC21.08■□□□□ 0.97
DDX11Q96FC9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX11Q96FC9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.08■□□□□ 0.96
DDX11Q96FC9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
DDX11Q96FC9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX11Q96FC9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX11Q96FC9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX11Q96FC9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX11Q96FC9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DDX11Q96FC9 AC233702.3-201ENST00000578656 1387 ntBASIC21.08■□□□□ 0.96
DDX11Q96FC9 LINC00602-201ENST00000629776 2065 ntBASIC21.08■□□□□ 0.96
DDX11Q96FC9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX11Q96FC9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX11Q96FC9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX11Q96FC9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX11Q96FC9 LINC00167-201ENST00000530583 1419 ntBASIC21.07■□□□□ 0.96
DDX11Q96FC9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms