Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF31Q96EP0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF31Q96EP0 ESPNP-201ENST00000270691 2015 ntBASIC17.14■□□□□ 0.33
RNF31Q96EP0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 AC068880.1-201ENST00000507289 2297 ntBASIC17.14■□□□□ 0.33
RNF31Q96EP0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF31Q96EP0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF31Q96EP0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF31Q96EP0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF31Q96EP0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF31Q96EP0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF31Q96EP0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF31Q96EP0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 MTCL1P1-201ENST00000446207 792 ntBASIC17.13■□□□□ 0.33
RNF31Q96EP0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF31Q96EP0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF31Q96EP0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF31Q96EP0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF31Q96EP0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RNF31Q96EP0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 MIR940-201ENST00000401276 94 ntBASIC17.12■□□□□ 0.33
RNF31Q96EP0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF31Q96EP0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF31Q96EP0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF31Q96EP0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF31Q96EP0 AC139713.2-201ENST00000641328 2723 ntBASIC17.11■□□□□ 0.33
RNF31Q96EP0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 AP001269.4-201ENST00000609611 512 ntBASIC17.11■□□□□ 0.33
RNF31Q96EP0 AC114341.1-201ENST00000618070 349 ntBASIC17.11■□□□□ 0.33
RNF31Q96EP0 AF228730.7-201ENST00000641842 219 ntBASIC17.11■□□□□ 0.33
RNF31Q96EP0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF31Q96EP0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF31Q96EP0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF31Q96EP0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF31Q96EP0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF31Q96EP0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF31Q96EP0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms