Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 AC024563.2-201ENST00000603282 481 ntBASIC20.03■□□□□ 0.8
SMARCE1Q969G3 AL138966.2-201ENST00000621997 464 ntBASIC20.03■□□□□ 0.8
SMARCE1Q969G3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 AC009949.1-201ENST00000623048 1830 ntBASIC20.03■□□□□ 0.8
SMARCE1Q969G3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCE1Q969G3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 AC080080.1-201ENST00000625121 2420 ntBASIC20.02■□□□□ 0.8
SMARCE1Q969G3 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 AL596275.1-201ENST00000423464 877 ntBASIC20.02■□□□□ 0.8
SMARCE1Q969G3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCE1Q969G3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCE1Q969G3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCE1Q969G3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
SMARCE1Q969G3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SMARCE1Q969G3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCE1Q969G3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCE1Q969G3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SMARCE1Q969G3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 AL023973.1-201ENST00000624619 620 ntBASIC20.01■□□□□ 0.79
SMARCE1Q969G3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 HLA-J-201ENST00000462773 1622 ntBASIC20.01■□□□□ 0.79
SMARCE1Q969G3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMARCE1Q969G3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20■□□□□ 0.79
SMARCE1Q969G3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
SMARCE1Q969G3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMARCE1Q969G3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20■□□□□ 0.79
SMARCE1Q969G3 CD70-202ENST00000423145 881 ntTSL 2 BASIC20■□□□□ 0.79
SMARCE1Q969G3 KRT18P65-201ENST00000439811 1286 ntBASIC20■□□□□ 0.79
SMARCE1Q969G3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SMARCE1Q969G3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20■□□□□ 0.79
SMARCE1Q969G3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20■□□□□ 0.79
SMARCE1Q969G3 AC145285.6-201ENST00000604632 637 ntBASIC20■□□□□ 0.79
SMARCE1Q969G3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SMARCE1Q969G3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms