Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RPGRQ92834 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRQ92834 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.77■■□□□ 1.08
RPGRQ92834 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.77■■□□□ 1.08
RPGRQ92834 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.77■■□□□ 1.08
RPGRQ92834 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.77■■□□□ 1.08
RPGRQ92834 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RPGRQ92834 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.77■■□□□ 1.08
RPGRQ92834 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRQ92834 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRQ92834 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RPGRQ92834 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRQ92834 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RPGRQ92834 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RPGRQ92834 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.77■■□□□ 1.07
RPGRQ92834 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.76■■□□□ 1.07
RPGRQ92834 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RPGRQ92834 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RPGRQ92834 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RPGRQ92834 IGHV3-52-201ENST00000519770 353 ntBASIC21.76■■□□□ 1.07
RPGRQ92834 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 STK25P1-201ENST00000585406 838 ntBASIC21.76■■□□□ 1.07
RPGRQ92834 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RPGRQ92834 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.76■■□□□ 1.07
RPGRQ92834 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRQ92834 AC097637.2-201ENST00000624096 1997 ntBASIC21.76■■□□□ 1.07
RPGRQ92834 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.76■■□□□ 1.07
RPGRQ92834 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RPGRQ92834 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RPGRQ92834 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
RPGRQ92834 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RPGRQ92834 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.75■■□□□ 1.07
RPGRQ92834 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.75■■□□□ 1.07
RPGRQ92834 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.75■■□□□ 1.07
RPGRQ92834 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.75■■□□□ 1.07
RPGRQ92834 PDPK2P-202ENST00000562415 1191 ntBASIC21.75■■□□□ 1.07
RPGRQ92834 AP002472.1-201ENST00000577490 586 ntBASIC21.75■■□□□ 1.07
RPGRQ92834 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.75■■□□□ 1.07
RPGRQ92834 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
RPGRQ92834 AC004877.2-201ENST00000623941 599 ntBASIC21.75■■□□□ 1.07
RPGRQ92834 AC010507.1-201ENST00000633895 436 ntBASIC21.75■■□□□ 1.07
RPGRQ92834 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RPGRQ92834 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.75■■□□□ 1.07
RPGRQ92834 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRQ92834 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.74■■□□□ 1.07
RPGRQ92834 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RPGRQ92834 PTCHD3P3-201ENST00000403073 906 ntBASIC21.74■■□□□ 1.07
RPGRQ92834 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RPGRQ92834 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.74■■□□□ 1.07
RPGRQ92834 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.74■■□□□ 1.07
RPGRQ92834 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.74■■□□□ 1.07
RPGRQ92834 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.74■■□□□ 1.07
RPGRQ92834 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRQ92834 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.74■■□□□ 1.07
RPGRQ92834 BX276092.7-203ENST00000637198 1536 ntBASIC21.74■■□□□ 1.07
RPGRQ92834 BCAR1-209ENST00000546196 1340 ntBASIC21.74■■□□□ 1.07
RPGRQ92834 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRQ92834 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRQ92834 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.74■■□□□ 1.07
RPGRQ92834 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RPGRQ92834 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRQ92834 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRQ92834 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.73■■□□□ 1.07
RPGRQ92834 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RPGRQ92834 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRQ92834 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRQ92834 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.73■■□□□ 1.07
RPGRQ92834 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.73■■□□□ 1.07
RPGRQ92834 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRQ92834 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.73■■□□□ 1.07
RPGRQ92834 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.73■■□□□ 1.07
RPGRQ92834 AL645939.2-201ENST00000427340 991 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms