Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.89■□□□□ 0.61
DDX1Q92499 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.89■□□□□ 0.61
DDX1Q92499 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 AL592071.1-201ENST00000611956 408 ntBASIC18.89■□□□□ 0.61
DDX1Q92499 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX1Q92499 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX1Q92499 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
DDX1Q92499 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX1Q92499 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 AC010460.3-201ENST00000511359 1579 ntBASIC18.89■□□□□ 0.61
DDX1Q92499 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX1Q92499 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX1Q92499 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX1Q92499 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX1Q92499 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 KRT8P26-201ENST00000534154 1276 ntBASIC18.88■□□□□ 0.61
DDX1Q92499 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.88■□□□□ 0.61
DDX1Q92499 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
DDX1Q92499 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.88■□□□□ 0.61
DDX1Q92499 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
DDX1Q92499 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX1Q92499 BX276092.7-203ENST00000637198 1536 ntBASIC18.88■□□□□ 0.61
DDX1Q92499 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX1Q92499 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX1Q92499 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX1Q92499 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX1Q92499 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX1Q92499 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX1Q92499 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
DDX1Q92499 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DDX1Q92499 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX1Q92499 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX1Q92499 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX1Q92499 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX1Q92499 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX1Q92499 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.87■□□□□ 0.61
DDX1Q92499 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 GUSBP12-201ENST00000513727 720 ntBASIC18.87■□□□□ 0.61
DDX1Q92499 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DDX1Q92499 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX1Q92499 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX1Q92499 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
DDX1Q92499 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
DDX1Q92499 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX1Q92499 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX1Q92499 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX1Q92499 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX1Q92499 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX1Q92499 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX1Q92499 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX1Q92499 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
DDX1Q92499 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX1Q92499 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX1Q92499 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX1Q92499 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms