Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16■□□□□ 0.15
RNF138Q8WVD3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
RNF138Q8WVD3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16■□□□□ 0.15
RNF138Q8WVD3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16■□□□□ 0.15
RNF138Q8WVD3 TK1-204ENST00000590430 683 ntTSL 3 BASIC16■□□□□ 0.15
RNF138Q8WVD3 MTDHP3-201ENST00000594186 672 ntBASIC16■□□□□ 0.15
RNF138Q8WVD3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
RNF138Q8WVD3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16■□□□□ 0.15
RNF138Q8WVD3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
RNF138Q8WVD3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 LYSMD4-203ENST00000378904 2122 ntBASIC16■□□□□ 0.15
RNF138Q8WVD3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF138Q8WVD3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16■□□□□ 0.15
RNF138Q8WVD3 AL133373.2-201ENST00000623187 2828 ntBASIC16■□□□□ 0.15
RNF138Q8WVD3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 AC148477.5-201ENST00000625164 1645 ntBASIC15.99■□□□□ 0.15
RNF138Q8WVD3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 AL020989.1-201ENST00000422979 469 ntBASIC15.99■□□□□ 0.15
RNF138Q8WVD3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF138Q8WVD3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 AL356309.3-201ENST00000624132 1934 ntBASIC15.98■□□□□ 0.15
RNF138Q8WVD3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 AC079781.3-201ENST00000449110 356 ntBASIC15.98■□□□□ 0.15
RNF138Q8WVD3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 STK19B-204ENST00000512515 211 ntBASIC15.98■□□□□ 0.15
RNF138Q8WVD3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 SART3-203ENST00000546611 1184 ntBASIC15.98■□□□□ 0.15
RNF138Q8WVD3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 AL031008.1-201ENST00000619963 541 ntBASIC15.98■□□□□ 0.15
RNF138Q8WVD3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 TP73-AS1-207ENST00000624167 988 ntBASIC15.98■□□□□ 0.15
RNF138Q8WVD3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF138Q8WVD3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF138Q8WVD3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF138Q8WVD3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF138Q8WVD3 LINC00896-202ENST00000609602 2128 ntBASIC15.97■□□□□ 0.15
RNF138Q8WVD3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF138Q8WVD3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF138Q8WVD3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF138Q8WVD3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF138Q8WVD3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms