Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 AC092865.7-201ENST00000641832 219 ntBASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 AC060834.1-201ENST00000443027 2032 ntBASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS4Y2Q8TD47 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 C2orf69P3-201ENST00000565542 1120 ntBASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS4Y2Q8TD47 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 LINC01311-201ENST00000565162 1445 ntBASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 AL390955.1-201ENST00000428694 934 ntBASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 EGLN1P1-201ENST00000531623 762 ntBASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 AC106820.2-201ENST00000563775 3264 ntBASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.53■□□□□ 0.08
RPS4Y2Q8TD47 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms