Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 AC104819.1-201ENST00000504587 486 ntBASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 AP000867.3-201ENST00000524675 377 ntBASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 AC012615.1-201ENST00000565797 1299 ntBASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 OR6D1P-202ENST00000641007 5290 ntBASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 AC006116.8-202ENST00000587620 1550 ntBASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 AC020916.1-201ENST00000587762 1774 ntBASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 AC074051.2-201ENST00000565115 352 ntBASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC148Q8NFR7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 BX276092.7-203ENST00000637198 1536 ntBASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CCDC148Q8NFR7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
CCDC148Q8NFR7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 NSUN5P1-202ENST00000421140 1535 ntBASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 NSUN5P2-203ENST00000457352 1529 ntBASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms