Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTL9Q8NET4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 SIGLEC30P-201ENST00000455569 941 ntBASIC21.77■■□□□ 1.08
RTL9Q8NET4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 AC005593.1-201ENST00000624894 515 ntBASIC21.77■■□□□ 1.08
RTL9Q8NET4 REXO1L9P-201ENST00000604264 2108 ntBASIC21.77■■□□□ 1.08
RTL9Q8NET4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTL9Q8NET4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTL9Q8NET4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
RTL9Q8NET4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTL9Q8NET4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL9Q8NET4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL9Q8NET4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL9Q8NET4 PMS2P2-201ENST00000425039 1128 ntBASIC21.76■■□□□ 1.07
RTL9Q8NET4 AC007967.2-201ENST00000432613 625 ntBASIC21.76■■□□□ 1.07
RTL9Q8NET4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.76■■□□□ 1.07
RTL9Q8NET4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTL9Q8NET4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL9Q8NET4 AC009336.1-201ENST00000608941 1553 ntBASIC21.76■■□□□ 1.07
RTL9Q8NET4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTL9Q8NET4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL9Q8NET4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTL9Q8NET4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.76■■□□□ 1.07
RTL9Q8NET4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTL9Q8NET4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 AC108751.1-201ENST00000490852 363 ntBASIC21.75■■□□□ 1.07
RTL9Q8NET4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 AC040169.1-201ENST00000565382 521 ntBASIC21.75■■□□□ 1.07
RTL9Q8NET4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 AC006504.4-201ENST00000592118 1568 ntBASIC21.75■■□□□ 1.07
RTL9Q8NET4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 AP000997.3-201ENST00000623333 2250 ntBASIC21.75■■□□□ 1.07
RTL9Q8NET4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTL9Q8NET4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
RTL9Q8NET4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 AL355385.1-201ENST00000606123 409 ntBASIC21.74■■□□□ 1.07
RTL9Q8NET4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.74■■□□□ 1.07
RTL9Q8NET4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTL9Q8NET4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms