Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
CFAP43Q8NDM7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 CD63-210ENST00000550776 870 ntTSL 5 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC27.56■■■□□ 2
CFAP43Q8NDM7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC27.55■■■□□ 2
CFAP43Q8NDM7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CFAP43Q8NDM7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
CFAP43Q8NDM7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
CFAP43Q8NDM7 AC132938.5-201ENST00000624980 1813 ntBASIC27.55■■■□□ 2
CFAP43Q8NDM7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC27.55■■■□□ 2
CFAP43Q8NDM7 BX276092.7-203ENST00000637198 1536 ntBASIC27.55■■■□□ 2
CFAP43Q8NDM7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC27.55■■■□□ 2
CFAP43Q8NDM7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
CFAP43Q8NDM7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CFAP43Q8NDM7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CFAP43Q8NDM7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
CFAP43Q8NDM7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC27.55■■■□□ 2
CFAP43Q8NDM7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC27.55■■■□□ 2
CFAP43Q8NDM7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC27.55■■■□□ 2
CFAP43Q8NDM7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC27.55■■■□□ 2
CFAP43Q8NDM7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC27.55■■■□□ 2
CFAP43Q8NDM7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 TBC1D3P5-201ENST00000579401 1545 ntBASIC27.54■■■□□ 2
CFAP43Q8NDM7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC27.54■■■□□ 2
CFAP43Q8NDM7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC27.54■■■□□ 2
CFAP43Q8NDM7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC27.54■■■□□ 2
CFAP43Q8NDM7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC27.54■■■□□ 2
CFAP43Q8NDM7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC27.54■■■□□ 2
CFAP43Q8NDM7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC27.54■■■□□ 2
CFAP43Q8NDM7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC27.54■■■□□ 2
CFAP43Q8NDM7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC27.54■■■□□ 2
CFAP43Q8NDM7 AC073592.5-201ENST00000624854 528 ntBASIC27.54■■■□□ 2
CFAP43Q8NDM7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
CFAP43Q8NDM7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CFAP43Q8NDM7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CFAP43Q8NDM7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC27.53■■■□□ 2
CFAP43Q8NDM7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
CFAP43Q8NDM7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC27.53■■■□□ 2
CFAP43Q8NDM7 AJ011932.1-201ENST00000621707 465 ntBASIC27.53■■■□□ 2
CFAP43Q8NDM7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC27.53■■■□□ 2
CFAP43Q8NDM7 FLJ13224-201ENST00000313737 1514 ntBASIC27.53■■■□□ 2
CFAP43Q8NDM7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
CFAP43Q8NDM7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC27.53■■■□□ 2
CFAP43Q8NDM7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC27.53■■■□□ 2
CFAP43Q8NDM7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC27.53■■■□□ 2
CFAP43Q8NDM7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CFAP43Q8NDM7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC27.53■■■□□ 2
CFAP43Q8NDM7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CFAP43Q8NDM7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC27.53■■■□□ 2
CFAP43Q8NDM7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
CFAP43Q8NDM7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC27.52■■■□□ 2
CFAP43Q8NDM7 COPE-202ENST00000349893 948 ntTSL 2 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC27.52■■■□□ 2
CFAP43Q8NDM7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC27.52■■■□□ 2
CFAP43Q8NDM7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CFAP43Q8NDM7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC27.52■■■□□ 2
CFAP43Q8NDM7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CFAP43Q8NDM7 PC-208ENST00000529047 1607 ntTSL 3 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
CFAP43Q8NDM7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 AC138761.1-201ENST00000584393 385 ntBASIC27.52■■■□□ 2
CFAP43Q8NDM7 REXO1L9P-201ENST00000604264 2108 ntBASIC27.52■■■□□ 2
CFAP43Q8NDM7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CFAP43Q8NDM7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
CFAP43Q8NDM7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC27.51■■■□□ 2
CFAP43Q8NDM7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 Z92544.3-201ENST00000624747 417 ntBASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CFAP43Q8NDM7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 PAWRP1-201ENST00000451083 565 ntBASIC27.5■■□□□ 1.99
CFAP43Q8NDM7 IGHV3-65-201ENST00000523210 341 ntBASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms