Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 MIR1909-201ENST00000411312 80 ntBASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 COX5BP8-201ENST00000416911 349 ntBASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 AL049812.1-201ENST00000432563 2267 ntBASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 AC005237.2-201ENST00000434368 219 ntBASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 AC112191.1-201ENST00000523689 701 ntBASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 AC099522.2-201ENST00000607001 744 ntBASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC168Q8NDH2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 AL049757.1-201ENST00000616842 1596 ntBASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 AL132655.2-201ENST00000596276 594 ntBASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 ACA64.2-201ENST00000459014 129 ntBASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 AD001527.2-201ENST00000622994 785 ntBASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 AC008677.1-201ENST00000519230 1561 ntBASIC14.73□□□□□ -0.05
CCDC168Q8NDH2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 IGHV3-72-202ENST00000621503 303 ntBASIC14.72□□□□□ -0.05
CCDC168Q8NDH2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms