Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.82■□□□□ 0.76
USP38Q8NB14 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.82■□□□□ 0.76
USP38Q8NB14 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.82■□□□□ 0.76
USP38Q8NB14 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.82■□□□□ 0.76
USP38Q8NB14 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP38Q8NB14 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.82■□□□□ 0.76
USP38Q8NB14 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.82■□□□□ 0.76
USP38Q8NB14 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
USP38Q8NB14 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
USP38Q8NB14 MED15P5-201ENST00000423150 992 ntBASIC19.81■□□□□ 0.76
USP38Q8NB14 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.81■□□□□ 0.76
USP38Q8NB14 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
USP38Q8NB14 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USP38Q8NB14 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.81■□□□□ 0.76
USP38Q8NB14 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
USP38Q8NB14 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.81■□□□□ 0.76
USP38Q8NB14 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.81■□□□□ 0.76
USP38Q8NB14 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.81■□□□□ 0.76
USP38Q8NB14 AL138831.2-201ENST00000606564 490 ntBASIC19.81■□□□□ 0.76
USP38Q8NB14 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 AL355877.3-201ENST00000622820 899 ntBASIC19.81■□□□□ 0.76
USP38Q8NB14 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
USP38Q8NB14 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
USP38Q8NB14 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.81■□□□□ 0.76
USP38Q8NB14 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.81■□□□□ 0.76
USP38Q8NB14 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP38Q8NB14 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
USP38Q8NB14 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.8■□□□□ 0.76
USP38Q8NB14 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 AL035633.1-201ENST00000406139 838 ntBASIC19.8■□□□□ 0.76
USP38Q8NB14 DNAJB3-202ENST00000449667 1266 ntBASIC19.8■□□□□ 0.76
USP38Q8NB14 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
USP38Q8NB14 AC145285.3-201ENST00000564603 959 ntBASIC19.8■□□□□ 0.76
USP38Q8NB14 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.8■□□□□ 0.76
USP38Q8NB14 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP38Q8NB14 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
USP38Q8NB14 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP38Q8NB14 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.8■□□□□ 0.76
USP38Q8NB14 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.79■□□□□ 0.76
USP38Q8NB14 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP38Q8NB14 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
USP38Q8NB14 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USP38Q8NB14 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.79■□□□□ 0.76
USP38Q8NB14 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.79■□□□□ 0.76
USP38Q8NB14 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.79■□□□□ 0.76
USP38Q8NB14 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.79■□□□□ 0.76
USP38Q8NB14 CYMP-203ENST00000474680 1263 ntBASIC19.79■□□□□ 0.76
USP38Q8NB14 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.79■□□□□ 0.76
USP38Q8NB14 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.79■□□□□ 0.76
USP38Q8NB14 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.79■□□□□ 0.76
USP38Q8NB14 AC011467.2-201ENST00000598425 242 ntBASIC19.79■□□□□ 0.76
USP38Q8NB14 FAM197Y3-203ENST00000618346 717 ntBASIC19.79■□□□□ 0.76
USP38Q8NB14 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.79■□□□□ 0.76
USP38Q8NB14 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms