Protein–RNA interactions for Protein: Q8N7F7

UBL4B, Ubiquitin-like protein 4B, humanhuman

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4BQ8N7F7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 ECEL1P3-201ENST00000427961 737 ntBASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 AC034232.1-201ENST00000506026 1064 ntBASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4BQ8N7F7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
UBL4BQ8N7F7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 AC024563.2-201ENST00000603282 481 ntBASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 TMEM191A-211ENST00000637163 1067 ntBASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 REXO1L11P-201ENST00000620964 1927 ntBASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 AL121761.2-201ENST00000598007 1648 ntBASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 KRT89P-201ENST00000620027 1478 ntBASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBL4BQ8N7F7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 CROCCP1-201ENST00000426910 5675 ntBASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4BQ8N7F7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 TSPY15P-201ENST00000457163 923 ntBASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4BQ8N7F7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms