Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 AC112698.1-201ENST00000510299 916 ntBASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 AC023511.2-201ENST00000618803 211 ntBASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHTF2Q8N3S3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 AC132938.6-201ENST00000623828 1655 ntBASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 AF186996.4-201ENST00000467186 377 ntBASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 SLC25A1P1-201ENST00000528351 927 ntBASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 MIR7706-201ENST00000613747 67 ntBASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PHTF2Q8N3S3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 AC243591.1-201ENST00000452967 1364 ntBASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 HNRNPDP1-201ENST00000439535 754 ntBASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 RNPS1P1-201ENST00000507437 918 ntBASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 MTDHP3-201ENST00000594186 672 ntBASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 AL049840.3-201ENST00000602669 611 ntBASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHTF2Q8N3S3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms