Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SIX5Q8N196 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SIX5Q8N196 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX5Q8N196 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.14■□□□□ 0.49
SIX5Q8N196 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.14■□□□□ 0.49
SIX5Q8N196 AC006504.4-201ENST00000592118 1568 ntBASIC18.14■□□□□ 0.49
SIX5Q8N196 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX5Q8N196 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
SIX5Q8N196 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX5Q8N196 HCG4B-203ENST00000450128 991 ntBASIC18.14■□□□□ 0.49
SIX5Q8N196 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX5Q8N196 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SIX5Q8N196 AC004706.3-202ENST00000621574 984 ntBASIC18.14■□□□□ 0.49
SIX5Q8N196 AD001527.2-201ENST00000622994 785 ntBASIC18.14■□□□□ 0.49
SIX5Q8N196 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.14■□□□□ 0.49
SIX5Q8N196 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX5Q8N196 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.14■□□□□ 0.49
SIX5Q8N196 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SIX5Q8N196 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SIX5Q8N196 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.14■□□□□ 0.49
SIX5Q8N196 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SIX5Q8N196 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIX5Q8N196 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.14■□□□□ 0.49
SIX5Q8N196 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.14■□□□□ 0.49
SIX5Q8N196 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.13■□□□□ 0.49
SIX5Q8N196 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SIX5Q8N196 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SIX5Q8N196 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SIX5Q8N196 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.13■□□□□ 0.49
SIX5Q8N196 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.13■□□□□ 0.49
SIX5Q8N196 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 TSEN15P1-201ENST00000423257 515 ntBASIC18.13■□□□□ 0.49
SIX5Q8N196 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.13■□□□□ 0.49
SIX5Q8N196 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SIX5Q8N196 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.13■□□□□ 0.49
SIX5Q8N196 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.13■□□□□ 0.49
SIX5Q8N196 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.13■□□□□ 0.49
SIX5Q8N196 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.13■□□□□ 0.49
SIX5Q8N196 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.13■□□□□ 0.49
SIX5Q8N196 AL031432.2-201ENST00000566714 459 ntBASIC18.13■□□□□ 0.49
SIX5Q8N196 AL928711.1-201ENST00000570165 459 ntBASIC18.13■□□□□ 0.49
SIX5Q8N196 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SIX5Q8N196 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIX5Q8N196 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.13■□□□□ 0.49
SIX5Q8N196 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.13■□□□□ 0.49
SIX5Q8N196 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.13■□□□□ 0.49
SIX5Q8N196 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.12■□□□□ 0.49
SIX5Q8N196 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.12■□□□□ 0.49
SIX5Q8N196 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.12■□□□□ 0.49
SIX5Q8N196 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
SIX5Q8N196 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.12■□□□□ 0.49
SIX5Q8N196 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SIX5Q8N196 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.12■□□□□ 0.49
SIX5Q8N196 BCRP1-201ENST00000444246 691 ntBASIC18.12■□□□□ 0.49
SIX5Q8N196 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.12■□□□□ 0.49
SIX5Q8N196 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SIX5Q8N196 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SIX5Q8N196 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SIX5Q8N196 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SIX5Q8N196 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
SIX5Q8N196 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIX5Q8N196 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SIX5Q8N196 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SIX5Q8N196 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SIX5Q8N196 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.11■□□□□ 0.49
SIX5Q8N196 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIX5Q8N196 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.11■□□□□ 0.49
SIX5Q8N196 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.11■□□□□ 0.49
SIX5Q8N196 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.11■□□□□ 0.49
SIX5Q8N196 AC092474.2-201ENST00000424288 719 ntBASIC18.11■□□□□ 0.49
SIX5Q8N196 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.11■□□□□ 0.49
SIX5Q8N196 PRSS29P-201ENST00000440800 595 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms