Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 ACTL9-202ENST00000612068 1252 ntBASIC21.44■■□□□ 1.02
SLX4Q8IY92 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLX4Q8IY92 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.44■■□□□ 1.02
SLX4Q8IY92 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLX4Q8IY92 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLX4Q8IY92 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SLX4Q8IY92 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 DDX43P3-201ENST00000441064 443 ntBASIC21.43■■□□□ 1.02
SLX4Q8IY92 AC244107.1-201ENST00000442033 332 ntBASIC21.43■■□□□ 1.02
SLX4Q8IY92 TIMM8BP1-201ENST00000452384 211 ntBASIC21.43■■□□□ 1.02
SLX4Q8IY92 AC087163.2-201ENST00000457299 853 ntBASIC21.43■■□□□ 1.02
SLX4Q8IY92 AC015911.4-201ENST00000588022 1070 ntBASIC21.43■■□□□ 1.02
SLX4Q8IY92 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 AL035252.4-201ENST00000624174 288 ntBASIC21.43■■□□□ 1.02
SLX4Q8IY92 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 KRT18P32-201ENST00000424695 1287 ntBASIC21.43■■□□□ 1.02
SLX4Q8IY92 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 MIR4745-201ENST00000577608 62 ntBASIC21.43■■□□□ 1.02
SLX4Q8IY92 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLX4Q8IY92 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.43■■□□□ 1.02
SLX4Q8IY92 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLX4Q8IY92 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLX4Q8IY92 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLX4Q8IY92 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.42■■□□□ 1.02
SLX4Q8IY92 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLX4Q8IY92 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLX4Q8IY92 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.42■■□□□ 1.02
SLX4Q8IY92 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.42■■□□□ 1.02
SLX4Q8IY92 DUX4L27-201ENST00000554796 1261 ntBASIC21.42■■□□□ 1.02
SLX4Q8IY92 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLX4Q8IY92 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.42■■□□□ 1.02
SLX4Q8IY92 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.42■■□□□ 1.02
SLX4Q8IY92 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.42■■□□□ 1.02
SLX4Q8IY92 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLX4Q8IY92 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLX4Q8IY92 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLX4Q8IY92 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 PMS2P4-201ENST00000412466 1052 ntBASIC21.41■■□□□ 1.02
SLX4Q8IY92 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 SPDYE11-202ENST00000450699 704 ntBASIC21.41■■□□□ 1.02
SLX4Q8IY92 AC067863.1-201ENST00000494933 530 ntBASIC21.41■■□□□ 1.02
SLX4Q8IY92 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 AC112191.1-201ENST00000523689 701 ntBASIC21.41■■□□□ 1.02
SLX4Q8IY92 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 SPDYE9P-201ENST00000570642 692 ntBASIC21.41■■□□□ 1.02
SLX4Q8IY92 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 SPDYE10P-202ENST00000612005 668 ntBASIC21.41■■□□□ 1.02
SLX4Q8IY92 SPDYE8P-202ENST00000612377 668 ntBASIC21.41■■□□□ 1.02
SLX4Q8IY92 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLX4Q8IY92 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.41■■□□□ 1.02
SLX4Q8IY92 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLX4Q8IY92 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
SLX4Q8IY92 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLX4Q8IY92 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLX4Q8IY92 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLX4Q8IY92 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms