Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 AC026271.2-201ENST00000428091 497 ntBASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 MYC-209ENST00000641252 345 ntBASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 KRT8P11-201ENST00000409686 1436 ntBASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 AL662844.4-201ENST00000606367 2838 ntBASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 DBET-201ENST00000630918 3363 ntBASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 AC097658.1-201ENST00000475555 843 ntBASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 AC083906.2-201ENST00000511578 360 ntBASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 AC092384.3-202ENST00000564646 2873 ntBASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 AC092171.3-201ENST00000610122 2651 ntBASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD2Q8IV50 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms