Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 AC005237.2-201ENST00000434368 219 ntBASIC22.12■■□□□ 1.13
COL23A1Q86Y22 CNN2P2-201ENST00000443536 909 ntBASIC22.12■■□□□ 1.13
COL23A1Q86Y22 CNN2P3-201ENST00000450201 906 ntBASIC22.12■■□□□ 1.13
COL23A1Q86Y22 DUTP2-201ENST00000519164 463 ntBASIC22.12■■□□□ 1.13
COL23A1Q86Y22 AP005018.1-201ENST00000525475 301 ntBASIC22.12■■□□□ 1.13
COL23A1Q86Y22 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 ACTL9-202ENST00000612068 1252 ntBASIC22.12■■□□□ 1.13
COL23A1Q86Y22 AL136317.3-201ENST00000618497 906 ntBASIC22.12■■□□□ 1.13
COL23A1Q86Y22 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
COL23A1Q86Y22 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 BSG-215ENST00000618006 1329 ntTSL 2 BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 AL355306.1-201ENST00000415580 579 ntBASIC22.11■■□□□ 1.13
COL23A1Q86Y22 FAM58DP-201ENST00000428076 619 ntBASIC22.11■■□□□ 1.13
COL23A1Q86Y22 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 AC069335.1-201ENST00000489972 472 ntBASIC22.11■■□□□ 1.13
COL23A1Q86Y22 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 LINC02560-201ENST00000596379 459 ntBASIC22.11■■□□□ 1.13
COL23A1Q86Y22 AL008721.1-201ENST00000609964 604 ntBASIC22.11■■□□□ 1.13
COL23A1Q86Y22 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.11■■□□□ 1.13
COL23A1Q86Y22 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 TUBB3P1-201ENST00000405796 1332 ntBASIC22.1■■□□□ 1.13
COL23A1Q86Y22 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 RAC2-204ENST00000406508 893 ntTSL 5 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 FALEC-201ENST00000416894 566 ntTSL 3 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 AL671277.1-201ENST00000429656 993 ntBASIC22.1■■□□□ 1.13
COL23A1Q86Y22 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 AL513480.1-201ENST00000451731 511 ntBASIC22.1■■□□□ 1.13
COL23A1Q86Y22 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 AL512356.2-201ENST00000546955 174 ntBASIC22.1■■□□□ 1.13
COL23A1Q86Y22 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 AC099522.2-201ENST00000607001 744 ntBASIC22.1■■□□□ 1.13
COL23A1Q86Y22 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 AC008761.3-201ENST00000624803 892 ntBASIC22.1■■□□□ 1.13
COL23A1Q86Y22 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
COL23A1Q86Y22 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 AC009336.1-201ENST00000608941 1553 ntBASIC22.09■■□□□ 1.13
COL23A1Q86Y22 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.09■■□□□ 1.13
COL23A1Q86Y22 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 CECR7-204ENST00000609932 568 ntTSL 2 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms