Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC004967.1-201ENST00000453589 447 ntBASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 AL022326.1-202ENST00000641533 845 ntBASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 AC100803.2-201ENST00000562459 1963 ntBASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RAI1Q7Z5J4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAI1Q7Z5J4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RAI1Q7Z5J4 ABALON-201ENST00000629058 1903 ntBASIC15.08■□□□□ 0
RAI1Q7Z5J4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 AC138028.4-201ENST00000564984 1845 ntBASIC15.08■□□□□ 0
RAI1Q7Z5J4 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.08■□□□□ 0
RAI1Q7Z5J4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 AC004817.3-201ENST00000602957 2129 ntBASIC15.08■□□□□ 0
RAI1Q7Z5J4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAI1Q7Z5J4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.08■□□□□ 0
RAI1Q7Z5J4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.07■□□□□ 0
RAI1Q7Z5J4 AC103564.2-201ENST00000432853 1299 ntBASIC15.07■□□□□ 0
RAI1Q7Z5J4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 MCCD1P2-201ENST00000423228 335 ntBASIC15.07■□□□□ 0
RAI1Q7Z5J4 RPS8P6-201ENST00000426177 609 ntBASIC15.07■□□□□ 0
RAI1Q7Z5J4 AP006288.1-201ENST00000446065 395 ntBASIC15.07■□□□□ 0
RAI1Q7Z5J4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 AL390961.4-201ENST00000623958 2535 ntBASIC15.07■□□□□ 0
RAI1Q7Z5J4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAI1Q7Z5J4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.07■□□□□ 0
RAI1Q7Z5J4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RAI1Q7Z5J4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.06■□□□□ 0
RAI1Q7Z5J4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.06■□□□□ 0
RAI1Q7Z5J4 SPDYE21P-201ENST00000413323 827 ntBASIC15.06■□□□□ 0
RAI1Q7Z5J4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.06■□□□□ 0
RAI1Q7Z5J4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAI1Q7Z5J4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.06■□□□□ 0
RAI1Q7Z5J4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms