Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 RPS15P9-201ENST00000494093 319 ntBASIC14.84□□□□□ -0.03
CSMD2Q7Z408 AC067863.1-201ENST00000494933 530 ntBASIC14.84□□□□□ -0.03
CSMD2Q7Z408 AC010336.2-201ENST00000564226 506 ntBASIC14.84□□□□□ -0.03
CSMD2Q7Z408 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 KRT8P48-201ENST00000515599 1220 ntBASIC14.84□□□□□ -0.03
CSMD2Q7Z408 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSMD2Q7Z408 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD2Q7Z408 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
CSMD2Q7Z408 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.83□□□□□ -0.03
CSMD2Q7Z408 AC107890.1-201ENST00000422478 521 ntBASIC14.83□□□□□ -0.03
CSMD2Q7Z408 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.83□□□□□ -0.03
CSMD2Q7Z408 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD2Q7Z408 AL390754.1-201ENST00000619088 582 ntBASIC14.83□□□□□ -0.03
CSMD2Q7Z408 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD2Q7Z408 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD2Q7Z408 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.83□□□□□ -0.03
CSMD2Q7Z408 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSMD2Q7Z408 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 RN7SL692P-201ENST00000464677 288 ntBASIC14.83□□□□□ -0.04
CSMD2Q7Z408 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 AC069335.1-201ENST00000489972 472 ntBASIC14.83□□□□□ -0.04
CSMD2Q7Z408 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CSMD2Q7Z408 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 AC027307.3-201ENST00000594262 1100 ntBASIC14.82□□□□□ -0.04
CSMD2Q7Z408 AL353135.1-201ENST00000606729 504 ntBASIC14.82□□□□□ -0.04
CSMD2Q7Z408 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 AL355306.1-201ENST00000415580 579 ntBASIC14.82□□□□□ -0.04
CSMD2Q7Z408 TREML5P-201ENST00000421694 576 ntBASIC14.82□□□□□ -0.04
CSMD2Q7Z408 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 SPTLC1P1-201ENST00000447199 261 ntBASIC14.82□□□□□ -0.04
CSMD2Q7Z408 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD2Q7Z408 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms