Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 Z92544.3-201ENST00000624747 417 ntBASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 AC116562.4-201ENST00000641316 2276 ntBASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
KRT28Q7Z3Y7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 IGHV3-52-201ENST00000519770 353 ntBASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 AC190387.1-201ENST00000551683 408 ntBASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 AJ011932.1-201ENST00000621707 465 ntBASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 AC100803.2-201ENST00000562459 1963 ntBASIC23.83■■□□□ 1.41
KRT28Q7Z3Y7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KRT28Q7Z3Y7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KRT28Q7Z3Y7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 DDX43P3-201ENST00000441064 443 ntBASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 AC015911.4-201ENST00000588022 1070 ntBASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 AF228730.6-201ENST00000641497 218 ntBASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 AC084121.3-201ENST00000641716 218 ntBASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 AC105233.6-201ENST00000642093 218 ntBASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.82■■□□□ 1.4
KRT28Q7Z3Y7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 RNA5SP421-201ENST00000516864 134 ntBASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 AL590787.1-201ENST00000568856 1315 ntBASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.81■■□□□ 1.4
KRT28Q7Z3Y7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 AL627223.1-201ENST00000416693 442 ntBASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 AC015922.1-201ENST00000421102 1152 ntBASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms