Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
COLCA1Q6ZS62 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 PP12613-201ENST00000424958 2230 ntBASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 ARMC10P1-201ENST00000313754 855 ntBASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 MIR3180-1-201ENST00000580374 94 ntBASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 MIR3180-3-201ENST00000584616 94 ntBASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 NPAP1P7-201ENST00000613027 823 ntBASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.27■□□□□ 0.04
COLCA1Q6ZS62 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COLCA1Q6ZS62 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 ATP5G2P1-201ENST00000433580 426 ntBASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 AP002414.4-201ENST00000589764 1148 ntBASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 AC069148.1-201ENST00000608741 768 ntBASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 SIRPAP1-201ENST00000448467 1770 ntBASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COLCA1Q6ZS62 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COLCA1Q6ZS62 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COLCA1Q6ZS62 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COLCA1Q6ZS62 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
COLCA1Q6ZS62 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COLCA1Q6ZS62 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.25■□□□□ 0.03
COLCA1Q6ZS62 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
COLCA1Q6ZS62 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms