Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 FLJ13224-201ENST00000313737 1514 ntBASIC15.53■□□□□ 0.08
C11orf88Q6PI97 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
C11orf88Q6PI97 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.52■□□□□ 0.08
C11orf88Q6PI97 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 AL031985.4-201ENST00000642138 673 ntBASIC15.52■□□□□ 0.08
C11orf88Q6PI97 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
C11orf88Q6PI97 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf88Q6PI97 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
C11orf88Q6PI97 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.52■□□□□ 0.07
C11orf88Q6PI97 AC046158.3-201ENST00000624947 2558 ntBASIC15.52■□□□□ 0.07
C11orf88Q6PI97 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
C11orf88Q6PI97 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf88Q6PI97 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf88Q6PI97 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
C11orf88Q6PI97 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 PP12613-201ENST00000424958 2230 ntBASIC15.51■□□□□ 0.07
C11orf88Q6PI97 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 AC116562.2-201ENST00000507042 360 ntBASIC15.51■□□□□ 0.07
C11orf88Q6PI97 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C11orf88Q6PI97 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms