Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 NTF6G-201ENST00000591094 616 ntBASIC13.45□□□□□ -0.26
MRPL54Q6P161 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.45□□□□□ -0.26
MRPL54Q6P161 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MRPL54Q6P161 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MRPL54Q6P161 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 AC093010.1-201ENST00000473625 1624 ntBASIC13.44□□□□□ -0.26
MRPL54Q6P161 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 AP000593.1-201ENST00000393668 712 ntBASIC13.44□□□□□ -0.26
MRPL54Q6P161 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 AL121832.2-201ENST00000610979 668 ntBASIC13.44□□□□□ -0.26
MRPL54Q6P161 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MRPL54Q6P161 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
MRPL54Q6P161 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL54Q6P161 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
MRPL54Q6P161 KRT8P11-201ENST00000409686 1436 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms