Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AP002469.2-201ENST00000531724 424 ntBASIC18.63■□□□□ 0.57
RNF43Q68DV7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 AP005901.3-202ENST00000581653 237 ntBASIC18.63■□□□□ 0.57
RNF43Q68DV7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 AC139530.3-201ENST00000620344 690 ntBASIC18.63■□□□□ 0.57
RNF43Q68DV7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF43Q68DV7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF43Q68DV7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 AC141586.5-201ENST00000624546 2050 ntBASIC18.62■□□□□ 0.57
RNF43Q68DV7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 AC124067.4-201ENST00000519691 2379 ntBASIC18.62■□□□□ 0.57
RNF43Q68DV7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 FOSL1P1-201ENST00000511041 816 ntBASIC18.62■□□□□ 0.57
RNF43Q68DV7 AC106795.1-205ENST00000512851 1056 ntBASIC18.62■□□□□ 0.57
RNF43Q68DV7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 SLC25A6P4-201ENST00000586535 553 ntBASIC18.62■□□□□ 0.57
RNF43Q68DV7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF43Q68DV7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF43Q68DV7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.61■□□□□ 0.57
RNF43Q68DV7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 AC091607.1-201ENST00000490318 1060 ntBASIC18.61■□□□□ 0.57
RNF43Q68DV7 KRT18P31-201ENST00000506277 1292 ntBASIC18.61■□□□□ 0.57
RNF43Q68DV7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 AC120114.3-201ENST00000611923 658 ntBASIC18.61■□□□□ 0.57
RNF43Q68DV7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.61■□□□□ 0.57
RNF43Q68DV7 AC124864.1-201ENST00000623408 392 ntBASIC18.61■□□□□ 0.57
RNF43Q68DV7 AC117500.6-201ENST00000624871 588 ntBASIC18.61■□□□□ 0.57
RNF43Q68DV7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF43Q68DV7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.61■□□□□ 0.57
RNF43Q68DV7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF43Q68DV7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF43Q68DV7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF43Q68DV7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF43Q68DV7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF43Q68DV7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms