Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
LGSNQ5TDP6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 RBM17P1-201ENST00000453646 1190 ntBASIC17.92■□□□□ 0.46
LGSNQ5TDP6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.92■□□□□ 0.46
LGSNQ5TDP6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.92■□□□□ 0.46
LGSNQ5TDP6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.92■□□□□ 0.46
LGSNQ5TDP6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LGSNQ5TDP6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 NKILA-202ENST00000614771 2598 ntBASIC17.91■□□□□ 0.46
LGSNQ5TDP6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 DDX43P3-201ENST00000441064 443 ntBASIC17.91■□□□□ 0.46
LGSNQ5TDP6 SEC1P-202ENST00000473944 940 ntBASIC17.91■□□□□ 0.46
LGSNQ5TDP6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 FITM1-202ENST00000559294 800 ntBASIC17.91■□□□□ 0.46
LGSNQ5TDP6 AL512604.3-201ENST00000569583 964 ntBASIC17.91■□□□□ 0.46
LGSNQ5TDP6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 AC092865.7-201ENST00000641832 219 ntBASIC17.91■□□□□ 0.46
LGSNQ5TDP6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.91■□□□□ 0.46
LGSNQ5TDP6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 LINC00167-201ENST00000530583 1419 ntBASIC17.9■□□□□ 0.46
LGSNQ5TDP6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 AL158047.1-201ENST00000445918 881 ntBASIC17.9■□□□□ 0.46
LGSNQ5TDP6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LGSNQ5TDP6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms