Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RUNDC3AQ59EK9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 AC010947.1-201ENST00000623454 693 ntBASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RUNDC3AQ59EK9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RUNDC3AQ59EK9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 KRT8P9-201ENST00000558927 1449 ntBASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 AC016396.2-201ENST00000562575 1417 ntBASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RUNDC3AQ59EK9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.76■□□□□ 0.27
RUNDC3AQ59EK9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms