Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 AC104581.1-202ENST00000635932 2618 ntBASIC20.71■□□□□ 0.91
CERKLQ49MI3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 AC003669.1-201ENST00000334569 611 ntBASIC20.7■□□□□ 0.9
CERKLQ49MI3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 AL591424.1-201ENST00000442569 1213 ntBASIC20.7■□□□□ 0.9
CERKLQ49MI3 PGAM5P1-201ENST00000518923 814 ntBASIC20.7■□□□□ 0.9
CERKLQ49MI3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 AC139530.3-201ENST00000620344 690 ntBASIC20.7■□□□□ 0.9
CERKLQ49MI3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CERKLQ49MI3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CERKLQ49MI3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 AC009947.1-201ENST00000444350 727 ntBASIC20.69■□□□□ 0.9
CERKLQ49MI3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 AC005593.1-201ENST00000624894 515 ntBASIC20.69■□□□□ 0.9
CERKLQ49MI3 PGM5P2-202ENST00000637225 1043 ntBASIC20.69■□□□□ 0.9
CERKLQ49MI3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CERKLQ49MI3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CERKLQ49MI3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 KRT18P3-201ENST00000451602 1288 ntBASIC20.68■□□□□ 0.9
CERKLQ49MI3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 SIGLEC30P-201ENST00000455569 941 ntBASIC20.68■□□□□ 0.9
CERKLQ49MI3 AC136632.2-201ENST00000512891 861 ntBASIC20.68■□□□□ 0.9
CERKLQ49MI3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 AC004706.3-202ENST00000621574 984 ntBASIC20.68■□□□□ 0.9
CERKLQ49MI3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 AC009113.1-201ENST00000570267 2443 ntBASIC20.68■□□□□ 0.9
CERKLQ49MI3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CERKLQ49MI3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CERKLQ49MI3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms