Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 HTR5BP-201ENST00000430851 1154 ntBASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM71Q2Q1W2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM71Q2Q1W2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM71Q2Q1W2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.27■□□□□ 0.67
TRIM71Q2Q1W2 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.27■□□□□ 0.67
TRIM71Q2Q1W2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TRIM71Q2Q1W2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 OR7E47P-204ENST00000575924 449 ntBASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 AL353135.1-201ENST00000606729 504 ntBASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 GPR89P-201ENST00000407924 1495 ntBASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM71Q2Q1W2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 PTCHD3P3-201ENST00000403073 906 ntBASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 AC254562.1-201ENST00000417586 456 ntBASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 AL078644.1-201ENST00000609881 752 ntBASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 AC009949.1-201ENST00000623048 1830 ntBASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM71Q2Q1W2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 MKNK2P1-201ENST00000437526 628 ntBASIC19.24■□□□□ 0.67
TRIM71Q2Q1W2 METTL21AP1-201ENST00000438852 635 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms