Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H1AQ02539 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.63□□□□□ -0.23
HIST1H1AQ02539 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 AC104390.1-201ENST00000555663 520 ntBASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 CICP6-201ENST00000457191 2729 ntBASIC13.63□□□□□ -0.23
HIST1H1AQ02539 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H1AQ02539 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H1AQ02539 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H1AQ02539 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms