Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RAE1P78406 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.83■□□□□ 0.28
RAE1P78406 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.83■□□□□ 0.28
RAE1P78406 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.83■□□□□ 0.28
RAE1P78406 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.83■□□□□ 0.28
RAE1P78406 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.83■□□□□ 0.28
RAE1P78406 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAE1P78406 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.83■□□□□ 0.28
RAE1P78406 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RAE1P78406 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.83■□□□□ 0.28
RAE1P78406 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.83■□□□□ 0.28
RAE1P78406 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.83■□□□□ 0.28
RAE1P78406 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.83■□□□□ 0.28
RAE1P78406 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RAE1P78406 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.83■□□□□ 0.28
RAE1P78406 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.83■□□□□ 0.28
RAE1P78406 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAE1P78406 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAE1P78406 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RAE1P78406 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAE1P78406 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAE1P78406 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.82■□□□□ 0.28
RAE1P78406 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.82■□□□□ 0.28
RAE1P78406 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 GUSBP12-201ENST00000513727 720 ntBASIC16.82■□□□□ 0.28
RAE1P78406 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 AL592071.1-201ENST00000611956 408 ntBASIC16.82■□□□□ 0.28
RAE1P78406 AC124864.1-201ENST00000623408 392 ntBASIC16.82■□□□□ 0.28
RAE1P78406 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.82■□□□□ 0.28
RAE1P78406 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 AC106820.2-201ENST00000563775 3264 ntBASIC16.82■□□□□ 0.28
RAE1P78406 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAE1P78406 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAE1P78406 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
RAE1P78406 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.81■□□□□ 0.28
RAE1P78406 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.81■□□□□ 0.28
RAE1P78406 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.81■□□□□ 0.28
RAE1P78406 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.81■□□□□ 0.28
RAE1P78406 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.81■□□□□ 0.28
RAE1P78406 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.81■□□□□ 0.28
RAE1P78406 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 COX5BP2-201ENST00000392354 334 ntBASIC16.81■□□□□ 0.28
RAE1P78406 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.81■□□□□ 0.28
RAE1P78406 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
RAE1P78406 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.81■□□□□ 0.28
RAE1P78406 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.81■□□□□ 0.28
RAE1P78406 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.81■□□□□ 0.28
RAE1P78406 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
RAE1P78406 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.81■□□□□ 0.28
RAE1P78406 AC005336.2-201ENST00000593183 939 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms