Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.53■□□□□ 0.08
HIST1H3AP68431 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HIST1H3AP68431 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 AL049597.2-201ENST00000565575 961 ntBASIC15.52■□□□□ 0.08
HIST1H3AP68431 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H3AP68431 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.52■□□□□ 0.08
HIST1H3AP68431 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H3AP68431 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H3AP68431 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.52■□□□□ 0.07
HIST1H3AP68431 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H3AP68431 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H3AP68431 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H3AP68431 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.52■□□□□ 0.07
HIST1H3AP68431 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H3AP68431 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H3AP68431 SIRPAP1-201ENST00000448467 1770 ntBASIC15.52■□□□□ 0.07
HIST1H3AP68431 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H3AP68431 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H3AP68431 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 PP12613-201ENST00000424958 2230 ntBASIC15.51■□□□□ 0.07
HIST1H3AP68431 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 FZD10-202ENST00000539839 3282 ntBASIC15.51■□□□□ 0.07
HIST1H3AP68431 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 KRT8P26-201ENST00000534154 1276 ntBASIC15.51■□□□□ 0.07
HIST1H3AP68431 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 AC090616.6-201ENST00000582640 721 ntBASIC15.51■□□□□ 0.07
HIST1H3AP68431 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 AL645608.8-201ENST00000606034 2086 ntBASIC15.51■□□□□ 0.07
HIST1H3AP68431 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H3AP68431 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HIST1H3AP68431 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms