Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RPS4XP62701 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.04■□□□□ 0.16
RPS4XP62701 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RPS4XP62701 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.04■□□□□ 0.16
RPS4XP62701 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.04■□□□□ 0.16
RPS4XP62701 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.04■□□□□ 0.16
RPS4XP62701 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 MIR662-201ENST00000384847 95 ntBASIC16.04■□□□□ 0.16
RPS4XP62701 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.04■□□□□ 0.16
RPS4XP62701 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.04■□□□□ 0.16
RPS4XP62701 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.04■□□□□ 0.16
RPS4XP62701 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.04■□□□□ 0.16
RPS4XP62701 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RPS4XP62701 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RPS4XP62701 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.04■□□□□ 0.16
RPS4XP62701 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.04■□□□□ 0.16
RPS4XP62701 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RPS4XP62701 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RPS4XP62701 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RPS4XP62701 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4XP62701 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.03■□□□□ 0.16
RPS4XP62701 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4XP62701 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4XP62701 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4XP62701 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RPS4XP62701 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4XP62701 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4XP62701 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4XP62701 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 TSPY12P-201ENST00000421279 868 ntBASIC16.03■□□□□ 0.16
RPS4XP62701 AC112698.1-201ENST00000510299 916 ntBASIC16.03■□□□□ 0.16
RPS4XP62701 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.03■□□□□ 0.16
RPS4XP62701 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.03■□□□□ 0.16
RPS4XP62701 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.03■□□□□ 0.16
RPS4XP62701 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4XP62701 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RPS4XP62701 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.03■□□□□ 0.16
RPS4XP62701 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.03■□□□□ 0.16
RPS4XP62701 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPS4XP62701 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RPS4XP62701 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RPS4XP62701 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.02■□□□□ 0.16
RPS4XP62701 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RPS4XP62701 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RPS4XP62701 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.02■□□□□ 0.16
RPS4XP62701 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.02■□□□□ 0.16
RPS4XP62701 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
RPS4XP62701 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.02■□□□□ 0.16
RPS4XP62701 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RPS4XP62701 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.02■□□□□ 0.16
RPS4XP62701 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.02■□□□□ 0.16
RPS4XP62701 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.02■□□□□ 0.16
RPS4XP62701 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPS4XP62701 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RPS4XP62701 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RPS4XP62701 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
RPS4XP62701 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4XP62701 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4XP62701 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.02■□□□□ 0.15
RPS4XP62701 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPS4XP62701 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms