Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.87■□□□□ 0.45
AP1S1P61966 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.87■□□□□ 0.45
AP1S1P61966 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.87■□□□□ 0.45
AP1S1P61966 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.87■□□□□ 0.45
AP1S1P61966 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.87■□□□□ 0.45
AP1S1P61966 AL450487.1-201ENST00000426799 995 ntBASIC17.87■□□□□ 0.45
AP1S1P61966 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.87■□□□□ 0.45
AP1S1P61966 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 KRT126P-201ENST00000549467 1181 ntBASIC17.87■□□□□ 0.45
AP1S1P61966 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.87■□□□□ 0.45
AP1S1P61966 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.87■□□□□ 0.45
AP1S1P61966 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
AP1S1P61966 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.87■□□□□ 0.45
AP1S1P61966 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.87■□□□□ 0.45
AP1S1P61966 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.87■□□□□ 0.45
AP1S1P61966 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.87■□□□□ 0.45
AP1S1P61966 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP1S1P61966 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S1P61966 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.86■□□□□ 0.45
AP1S1P61966 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.86■□□□□ 0.45
AP1S1P61966 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.86■□□□□ 0.45
AP1S1P61966 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S1P61966 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S1P61966 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
AP1S1P61966 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S1P61966 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.86■□□□□ 0.45
AP1S1P61966 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S1P61966 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S1P61966 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
AP1S1P61966 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.86■□□□□ 0.45
AP1S1P61966 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.86■□□□□ 0.45
AP1S1P61966 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.86■□□□□ 0.45
AP1S1P61966 IFNL4P1-201ENST00000607083 540 ntBASIC17.86■□□□□ 0.45
AP1S1P61966 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.86■□□□□ 0.45
AP1S1P61966 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S1P61966 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
AP1S1P61966 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP1S1P61966 NOC2LP2-201ENST00000407594 1944 ntBASIC17.86■□□□□ 0.45
AP1S1P61966 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.86■□□□□ 0.45
AP1S1P61966 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
AP1S1P61966 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
AP1S1P61966 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
AP1S1P61966 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
AP1S1P61966 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S1P61966 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S1P61966 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S1P61966 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.85■□□□□ 0.45
AP1S1P61966 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S1P61966 AC005104.2-201ENST00000427818 678 ntBASIC17.85■□□□□ 0.45
AP1S1P61966 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.85■□□□□ 0.45
AP1S1P61966 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S1P61966 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
AP1S1P61966 AC002558.1-201ENST00000488906 803 ntBASIC17.85■□□□□ 0.45
AP1S1P61966 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.85■□□□□ 0.45
AP1S1P61966 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.85■□□□□ 0.45
AP1S1P61966 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
AP1S1P61966 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.85■□□□□ 0.45
AP1S1P61966 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
AP1S1P61966 AC007613.1-201ENST00000572811 2597 ntBASIC17.85■□□□□ 0.45
AP1S1P61966 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
AP1S1P61966 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.85■□□□□ 0.45
AP1S1P61966 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.85■□□□□ 0.45
AP1S1P61966 AC012317.2-201ENST00000623305 2251 ntBASIC17.85■□□□□ 0.45
AP1S1P61966 LINC01451-201ENST00000623792 534 ntBASIC17.85■□□□□ 0.45
AP1S1P61966 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP1S1P61966 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.85■□□□□ 0.45
AP1S1P61966 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
AP1S1P61966 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S1P61966 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S1P61966 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
AP1S1P61966 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.84■□□□□ 0.45
AP1S1P61966 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
AP1S1P61966 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP1S1P61966 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms