Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 PIN1P1-201ENST00000412108 996 ntBASIC14.69□□□□□ -0.06
RIPPLY3P57055 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 AC105339.1-204ENST00000636249 355 ntBASIC14.69□□□□□ -0.06
RIPPLY3P57055 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.69□□□□□ -0.06
RIPPLY3P57055 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIPPLY3P57055 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 AC003669.1-201ENST00000334569 611 ntBASIC14.68□□□□□ -0.06
RIPPLY3P57055 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 MIR943-201ENST00000401286 94 ntBASIC14.68□□□□□ -0.06
RIPPLY3P57055 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 KRT18P27-201ENST00000427733 1299 ntBASIC14.68□□□□□ -0.06
RIPPLY3P57055 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 MIR3180-4-201ENST00000582223 153 ntBASIC14.68□□□□□ -0.06
RIPPLY3P57055 RN7SL190P-201ENST00000582519 257 ntBASIC14.68□□□□□ -0.06
RIPPLY3P57055 TMEM261P1-201ENST00000604899 340 ntBASIC14.68□□□□□ -0.06
RIPPLY3P57055 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.68□□□□□ -0.06
RIPPLY3P57055 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIPPLY3P57055 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RIPPLY3P57055 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.67□□□□□ -0.06
RIPPLY3P57055 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RIPPLY3P57055 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPPLY3P57055 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPPLY3P57055 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPPLY3P57055 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPPLY3P57055 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPPLY3P57055 HOXB1-202ENST00000577092 1414 ntBASIC14.67□□□□□ -0.06
RIPPLY3P57055 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RIPPLY3P57055 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms